Welcome!
Welcome to the Genomics England Research Environment User Guide.
In this documentation, we will provide you with the knowledge and training materials that you will need to navigate and analyse the wealth of data available to you.
We suggest that you go through this documentation step-by-step so that you become familiar with the data and the analysis tools within the Research Environment.
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What is the Research Environment?
All analysis on the Genomics England dataset will be done within a secure workspace called the Research Environment. This avoids any potential security breaches that may occur when using data, but does require the environment to be somewhat restrictive to enforce such protection. You will always have access to the most up-to-date research dataset available to you in the Research Environemnt and will be able to run your analyses on the Genomics England high-performance compute cluster.
Important Points
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Research Environment Useful Links
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Research Environment | https://re.extge.co.uk/ovd/ |
Staging Environment | http://re-staging.extge.co.uk/ |
File Transfer Application | https://airlock-staging.extge.co.uk/ |
Genomics England Service Desk | http://bit.ly/ge-servicedesk |
Data in the Research Environment
Below is a summary of the latest Main Programme data release for October 2018 (Version 5.1).
Getting Help
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If you should encounter a problem or need assistance while using the Research Environment, please feel free to submit a ticket to the Genomics England Service Desk and we will get back to you. |