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Key

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  1. log into the Research Environment
  2. open LabKey by double-clicking on the LabKey icon on the desktop
  3. sign in using the same credentials you used to access the Research Environment by clicking 'sign-in' in the top-right corner of the browser window
  4. at this point no data will be visible and you will be taken to an empty LabKey page
  5. Submit an issue to the Genomics England Service Desk entitled 'GeCIP researcher <username> requesting LabKey access' stating that you have successfully logged into LabKey within the Research Environment and are now requesting that your account be upgraded and you are given access to the LabKey projects to which you are entitled. You will be notified when this has been completed, and the next time you log into LabKey you should have access to the appropriate data.

Accessing your home drive

Your home drive contains links to shared files:

  • genomes - gives you access to the Genomics England datacentre and all of the sequencing data.
  • re_gecip - contains the tiering results completed by the Genomics England bioinformatics team and shared folders for each of the GeCIP domains. Access to the individual GeCIP domain folders is restricted to members of the domain.

Principles of data access

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