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titleAggregated variant calls (aggV2)

As part of the Main Programme V10 data release, we make available an aggregate multi-sample VCF (aggV2) comprising 78,195 germline genomes from the 100,000 Genomes Project on GRCh38. We also provide functional annotation files for all variants, variant and sample quality control (QC) metrics, inferred sample relatedness information, Principal Components, and inferred ancestry information for all samples in aggV2. The aggregate_gvcf_sample_stats table LabKey contains all sample-level information for participants in aggV2.


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